Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 10562
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol OLFM4   Gene   UCSC   Ensembl
Aliases GC1, GW112, OLM4, OlfD, UNQ362, bA209J19.1, hGC-1, hOLfD
Gene name olfactomedin 4
Alternate names olfactomedin-4, G-CSF-stimulated clone 1 protein, antiapoptotic protein GW112,
Gene location 13q14.3 (53028740: 53052060)     Exons: 5     NC_000013.11
Gene summary(Entrez) This gene was originally cloned from human myeloblasts and found to be selectively expressed in inflammed colonic epithelium. This gene encodes a member of the olfactomedin family. The encoded protein is an antiapoptotic factor that promotes tumor growth and is an extracellular matrix glycoprotein that facilitates cell adhesion. [provided by RefSeq, Mar 2011]
OMIM 614061

Protein Summary

Protein general information Q6UX06  

Name: Olfactomedin 4 (OLM4) (Antiapoptotic protein GW112) (G CSF stimulated clone 1 protein) (hGC 1) (hOLfD)

Length: 510  Mass: 57,280

Tissue specificity: Expressed during myeloid lineage development. Much higher expression in bone marrow neutrophils than in peripheral blood neutrophils (at protein level). Strongly expressed in the prostate, small intestine and colon and moderately expre

Sequence MRPGLSFLLALLFFLGQAAGDLGDVGPPIPSPGFSSFPGVDSSSSFSSSSRSGSSSSRSLGSGGSVSQLFSNFTG
SVDDRGTCQCSVSLPDTTFPVDRVERLEFTAHVLSQKFEKELSKVREYVQLISVYEKKLLNLTVRIDIMEKDTIS
YTELDFELIKVEVKEMEKLVIQLKESFGGSSEIVDQLEVEIRNMTLLVEKLETLDKNNVLAIRREIVALKTKLKE
CEASKDQNTPVVHPPPTPGSCGHGGVVNISKPSVVQLNWRGFSYLYGAWGRDYSPQHPNKGLYWVAPLNTDGRLL
EYYRLYNTLDDLLLYINARELRITYGQGSGTAVYNNNMYVNMYNTGNIARVNLTTNTIAVTQTLPNAAYNNRFSY
ANVAWQDIDFAVDENGLWVIYSTEASTGNMVISKLNDTTLQVLNTWYTKQYKPSASNAFMVCGVLYATRTMNTRT
EEIFYYYDTNTGKEGKLDIVMHKMQEKVQSINYNPFDQKLYVYNDGYLLNYDLSVLQKPQ
Structural information
Protein Domains
Olfactomedin-like. (245-507)
Interpro:  IPR003112 IPR031221 IPR011041 IPR015943
Prosite:   PS51132

Pfam:  
PF02191

DIP:  
59533
STRING:   ENSP00000219022;
Other Databases GeneCards:  OLFM4;  Malacards:  OLFM4

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0003824 catalytic activity
IEA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005615 extracellular space
IMP cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005739 mitochondrion
IEA cellular_component
GO:0005886 plasma membrane
IDA cellular_component
GO:0007155 cell adhesion
IEA biological_process
GO:0042581 specific granule
IDA cellular_component
GO:0042803 protein homodimerization
activity
IMP molecular_function
GO:0045296 cadherin binding
IMP molecular_function
GO:0048471 perinuclear region of cyt
oplasm
IDA cellular_component
GO:0051260 protein homooligomerizati
on
IMP biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:1900026 positive regulation of su
bstrate adhesion-dependen
t cell spreading
IDA biological_process
GO:0010939 regulation of necrotic ce
ll death
IMP biological_process
GO:0030141 secretory granule
IDA cellular_component
GO:0042582 azurophil granule
IDA cellular_component
GO:0042981 regulation of apoptotic p
rocess
IMP biological_process
GO:0050764 regulation of phagocytosi
s
IMP biological_process
GO:2000389 regulation of neutrophil
extravasation
IMP biological_process
GO:0003824 catalytic activity
IEA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
IEA cellular_component
GO:0005615 extracellular space
IEA cellular_component
GO:0005615 extracellular space
IMP cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005739 mitochondrion
IEA cellular_component
GO:0005739 mitochondrion
IEA cellular_component
GO:0005886 plasma membrane
IDA cellular_component
GO:0007155 cell adhesion
IEA biological_process
GO:0042581 specific granule
IDA cellular_component
GO:0042803 protein homodimerization
activity
IMP molecular_function
GO:0045296 cadherin binding
IMP molecular_function
GO:0048471 perinuclear region of cyt
oplasm
IDA cellular_component
GO:0051260 protein homooligomerizati
on
IMP biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:1900026 positive regulation of su
bstrate adhesion-dependen
t cell spreading
IDA biological_process
GO:0010939 regulation of necrotic ce
ll death
IMP biological_process
GO:0030141 secretory granule
IDA cellular_component
GO:0042582 azurophil granule
IDA cellular_component
GO:0042981 regulation of apoptotic p
rocess
IMP biological_process
GO:0050764 regulation of phagocytosi
s
IMP biological_process
GO:2000389 regulation of neutrophil
extravasation
IMP biological_process
GO:0005515 protein binding
IPI molecular_function
GO:0005615 extracellular space
IMP cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005886 plasma membrane
IDA cellular_component
GO:0042581 specific granule
IDA cellular_component
GO:0042803 protein homodimerization
activity
IMP molecular_function
GO:0045296 cadherin binding
IMP molecular_function
GO:0048471 perinuclear region of cyt
oplasm
IDA cellular_component
GO:0051260 protein homooligomerizati
on
IMP biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:1900026 positive regulation of su
bstrate adhesion-dependen
t cell spreading
IDA biological_process
GO:0010939 regulation of necrotic ce
ll death
IMP biological_process
GO:0030141 secretory granule
IDA cellular_component
GO:0042582 azurophil granule
IDA cellular_component
GO:0042981 regulation of apoptotic p
rocess
IMP biological_process
GO:0050764 regulation of phagocytosi
s
IMP biological_process
GO:2000389 regulation of neutrophil
extravasation
IMP biological_process

Diseases

Associated diseases References
Amyotrophic lateral sclerosis (ALS) PMID: 17362836
Embryo development PMID: 23605819
Endometriosis PMID: 21048224
Heart disease PMID: 17903304
Insulin resistance PMID: 17903298
Obesity PMID: 22484627
Endometriosis INFBASE21048224
Fertilizing defects PMID: 24999734
Stroke PMID: 17434096

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
21048224 Endometrio
sis



Show abstract