Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 22920
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol KIFAP3   Gene   UCSC   Ensembl
Aliases FLA3, KAP-1, KAP-3, KAP3, SMAP, Smg-GDS, dJ190I16.1
Gene name kinesin associated protein 3
Alternate names kinesin-associated protein 3, small G protein GDP dissociation stimulator, smg GDS-associated protein,
Gene location 1q24.2 (170074740: 169921328)     Exons: 24     NC_000001.11
Gene summary(Entrez) The small G protein GDP dissociation stimulator (smg GDS) is a regulator protein having two activities on a group of small G proteins including the Rho and Rap1 family members and Ki-Ras; one is to stimulate their GDP/GTP exchange reactions, and the other is to inhibit their interactions with membranes. The protein encoded by this gene contains 9 'Armadillo' repeats and interacts with the smg GDS protein through these repeats. This protein, which is highly concentrated around the endoplasmic reticulum, is phosphorylated by v-src, and this phosphorylation reduces the affinity of the protein for smg GDS. It is thought that this protein serves as a linker between human chromosome-associated polypeptide (HCAP) and KIF3A/B, a kinesin superfamily protein in the nucleus, and that it plays a role in the interaction of chromosomes with an ATPase motor protein. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2011]
OMIM 601836

Protein Summary

Protein general information Q92845  

Name: Kinesin associated protein 3 (KAP 3) (KAP3) (Smg GDS associated protein)

Length: 792  Mass: 91,205

Sequence MQGEDARYLKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKSLNANTDITSLARKVV
EECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPPFEGMEIDEVANINDMDEYIELLYEDIPDKV
RGSALILQLARNPDNLEELLLNETALGALARVLREDWKQSVELATNIIYIFFCFSSFSQFHGLITHYKIGALCMN
IIDHELKRHELWQEELSKKKKAVDEDPENQTLRKDYEKTFKKYQGLVVKQEQLLRVALYLLLNLAEDTRTELKMR
NKNIVHMLVKALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHEDLLNITLRLLLNLSFDT
GLRNKMVQVGLLPKLTALLGNDNYKQIAMCVLYHISMDDRFKSMFAYTDCIPQLMKMLFECSDERIDLELISFCI
NLAANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECL
GTLANLTIPDLDWELVLKEYKLVPYLKDKLKPGAAEDDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNA
QQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDIIAEYDEEWAKKIQSEK
FRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDLFYNSDGLIASEGAISPDFFNDYHLQNGDVV
GQHSFPGSLGMDGFGQPVGILGRPATAYGFRPDEPYYYGYGS
Structural information
Interpro:  IPR011989 IPR016024 IPR000225 IPR008658
Prosite:   PS50176
MINT:   6942059
STRING:   ENSP00000354560;
Other Databases GeneCards:  KIFAP3;  Malacards:  KIFAP3

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000794 condensed nuclear chromos
ome
IDA cellular_component
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005783 endoplasmic reticulum
IEA cellular_component
GO:0005794 Golgi apparatus
IEA cellular_component
GO:0005813 centrosome
IDA cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005930 axoneme
IEA cellular_component
GO:0006461 protein complex assembly
TAS biological_process
GO:0006890 retrograde vesicle-mediat
ed transport, Golgi to ER
TAS biological_process
GO:0007017 microtubule-based process
ISS biological_process
GO:0007018 microtubule-based movemen
t
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0008104 protein localization
IEA biological_process
GO:0008285 negative regulation of ce
ll proliferation
IEA biological_process
GO:0015630 microtubule cytoskeleton
IDA cellular_component
GO:0016939 kinesin II complex
ISS cellular_component
GO:0016939 kinesin II complex
IDA cellular_component
GO:0019886 antigen processing and pr
esentation of exogenous p
eptide antigen via MHC cl
ass II
TAS biological_process
GO:0019894 kinesin binding
IPI molecular_function
GO:0030990 intraciliary transport pa
rticle
IEA cellular_component
GO:0032391 photoreceptor connecting
cilium
IEA cellular_component
GO:0036064 ciliary basal body
IEA cellular_component
GO:0043066 negative regulation of ap
optotic process
IEA biological_process
GO:0046587 positive regulation of ca
lcium-dependent cell-cell
adhesion
IEA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0072383 plus-end-directed vesicle
transport along microtub
ule
TAS biological_process
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:1990075 periciliary membrane comp
artment
IEA cellular_component
GO:0005876 spindle microtubule
IDA cellular_component
GO:0000794 condensed nuclear chromos
ome
IDA cellular_component
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005783 endoplasmic reticulum
IEA cellular_component
GO:0005783 endoplasmic reticulum
TAS cellular_component
GO:0005794 Golgi apparatus
IEA cellular_component
GO:0005813 centrosome
IDA cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005871 kinesin complex
IEA cellular_component
GO:0005930 axoneme
IEA cellular_component
GO:0006461 protein complex assembly
TAS biological_process
GO:0006890 retrograde vesicle-mediat
ed transport, Golgi to ER
TAS biological_process
GO:0007017 microtubule-based process
IEA biological_process
GO:0007017 microtubule-based process
ISS biological_process
GO:0007018 microtubule-based movemen
t
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0008104 protein localization
IEA biological_process
GO:0008285 negative regulation of ce
ll proliferation
IEA biological_process
GO:0015630 microtubule cytoskeleton
IEA cellular_component
GO:0015630 microtubule cytoskeleton
IDA cellular_component
GO:0016939 kinesin II complex
IEA cellular_component
GO:0016939 kinesin II complex
ISS cellular_component
GO:0016939 kinesin II complex
IDA cellular_component
GO:0019886 antigen processing and pr
esentation of exogenous p
eptide antigen via MHC cl
ass II
TAS biological_process
GO:0019894 kinesin binding
IEA molecular_function
GO:0019894 kinesin binding
IPI molecular_function
GO:0030990 intraciliary transport pa
rticle
IEA cellular_component
GO:0032391 photoreceptor connecting
cilium
IEA cellular_component
GO:0036064 ciliary basal body
IEA cellular_component
GO:0043066 negative regulation of ap
optotic process
IEA biological_process
GO:0046587 positive regulation of ca
lcium-dependent cell-cell
adhesion
IEA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0072383 plus-end-directed vesicle
transport along microtub
ule
TAS biological_process
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:1990075 periciliary membrane comp
artment
IEA cellular_component
GO:0005876 spindle microtubule
IDA cellular_component
GO:0000794 condensed nuclear chromos
ome
IDA cellular_component
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005783 endoplasmic reticulum
TAS cellular_component
GO:0005813 centrosome
IDA cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0006461 protein complex assembly
TAS biological_process
GO:0006890 retrograde vesicle-mediat
ed transport, Golgi to ER
TAS biological_process
GO:0007017 microtubule-based process
ISS biological_process
GO:0007018 microtubule-based movemen
t
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0015630 microtubule cytoskeleton
IDA cellular_component
GO:0016939 kinesin II complex
ISS cellular_component
GO:0016939 kinesin II complex
IDA cellular_component
GO:0019886 antigen processing and pr
esentation of exogenous p
eptide antigen via MHC cl
ass II
TAS biological_process
GO:0019894 kinesin binding
IPI molecular_function
GO:0070062 extracellular exosome
IDA cellular_component
GO:0072383 plus-end-directed vesicle
transport along microtub
ule
TAS biological_process
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0097542 ciliary tip
TAS cellular_component
GO:0005876 spindle microtubule
IDA cellular_component

Diseases

Associated diseases References
Amyotrophic lateral sclerosis (ALS) PMID: 19451621
Endometriosis PMID: 25296917
Osteoporosis PMID: 19064610
Subfertility INFBASE25296917
Endometriosis INFBASE25296917

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
25296917 Endometrio
sis
rs12700667, WNT4 (rs7521902), rs1055144, GRB14 (rs10195252), PPARG (rs4684854), ITPR2-SSPN ( rs718314), CPEB4 (rs6861681), ADAMTS9 (rs6795735), LYPLAL1 (rs2820446 ), NISCH-STAB1 (rs498778), LY86 (rs1294421), RSPO3 (rs9491696), HOXC13 (rs1443512), TBX15-WA Europea
n
10254 (3194 cas
es including 13
64 Stage B case
s, 7060 control
s)
GRB14
KIFAP3
WNT4
CAB39L
Show abstract