Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 23082
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol PPRC1   Gene   UCSC   Ensembl
Aliases PRC
Gene name peroxisome proliferator-activated receptor gamma, coactivator-related 1
Alternate names peroxisome proliferator-activated receptor gamma coactivator-related protein 1, PGC-1-related coactivator,
Gene location 10q24.32 (102132993: 102150332)     Exons: 14     NC_000010.11
Gene summary(Entrez) The protein encoded by this gene is similar to PPAR-gamma coactivator 1 (PPARGC1/PGC-1), a protein that can activate mitochondrial biogenesis in part through a direct interaction with nuclear respiratory factor 1 (NRF1). This protein has been shown to interact with NRF1. It is thought to be a functional relative of PPAR-gamma coactivator 1 that activates mitochondrial biogenesis through NRF1 in response to proliferative signals. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013]

Protein Summary

Protein general information Q5VV67  

Name: Peroxisome proliferator activated receptor gamma coactivator related protein 1 (PGC 1 related coactivator) (PRC)

Length: 1664  Mass: 177,544

Tissue specificity: Strongly expressed in heart and skeletal muscle, moderately in lung, placenta, intestine, liver, kidney, spleen, thymus, colon and brain. Also expressed in several oncocytic thyroid tumors. {ECO

Sequence MAARRGRRDGVAPPPSGGPGPDPGGGARGSGWGSRSQAPYGTLGAVSGGEQVLLHEEAGDSGFVSLSRLGPSLRD
KDLEMEELMLQDETLLGTMQSYMDASLISLIEDFGSLGESRLSLEDQNEVSLLTALTEILDNADSENLSPFDSIP
DSELLVSPREGSSLHKLLTLSRTPPERDLITPVDPLGPSTGSSRGSGVEMSLPDPSWDFSPPSFLETSSPKLPSW
RPPRSRPRWGQSPPPQQRSDGEEEEEVASFSGQILAGELDNCVSSIPDFPMHLACPEEEDKATAAEMAVPAAGDE
SISSLSELVRAMHPYCLPNLTHLASLEDELQEQPDDLTLPEGCVVLEIVGQAATAGDDLEIPVVVRQVSPGPRPV
LLDDSLETSSALQLLMPTLESETEAAVPKVTLCSEKEGLSLNSEEKLDSACLLKPREVVEPVVPKEPQNPPANAA
PGSQRARKGRKKKSKEQPAACVEGYARRLRSSSRGQSTVGTEVTSQVDNLQKQPQEELQKESGPLQGKGKPRAWA
RAWAAALENSSPKNLERSAGQSSPAKEGPLDLYPKLADTIQTNPIPTHLSLVDSAQASPMPVDSVEADPTAVGPV
LAGPVPVDPGLVDLASTSSELVEPLPAEPVLINPVLADSAAVDPAVVPISDNLPPVDAVPSGPAPVDLALVDPVP
NDLTPVDPVLVKSRPTDPRRGAVSSALGGSAPQLLVESESLDPPKTIIPEVKEVVDSLKIESGTSATTHEARPRP
LSLSEYRRRRQQRQAETEERSPQPPTGKWPSLPETPTGLADIPCLVIPPAPAKKTALQRSPETPLEICLVPVGPS
PASPSPEPPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPP
SLPLSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPTCSVPWAPPPAPVSPYSS
TCTYGPLGWGPGPQHAPFWSTVPPPPLPPASIGRAVPQPKMESRGTPAGPPENVLPLSMAPPLSLGLPGHGAPQT
EPTKVEVKPVPASPHPKHKVSALVQSPQMKALACVSAEGVTVEEPASERLKPETQETRPREKPPLPATKAVPTPR
QSTVPKLPAVHPARLRKLSFLPTPRTQGSEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPPPAPADSLAVG
NSGGVDIPQEKRPLDRLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKAKSPKSTAQEGTLKPEGVTEAKHPA
AVRLQEGVHGPSRVHVGSGDHDYCVRSRTPPKKMPALVIPEVGSRWNVKRHQDITIKPVLSLGPAAPPPPCIAAS
REPLDHRTSSEQADPSAPCLAPSSLLSPEASPCRNDMNTRTPPEPSAKQRSMRCYRKACRSASPSSQGWQGRRGR
NSRSVSSGSNRTSEASSSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSR
SRSRSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGEIEECTIH
FRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLD
FDTLLKQAQKNLRR
Structural information
Protein Domains
RRM. (1543-1619)
Interpro:  IPR034605 IPR034597 IPR000504
Prosite:   PS50102

Pfam:  
PF00076
STRING:   ENSP00000278070;
Other Databases GeneCards:  PPRC1;  Malacards:  PPRC1

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000166 nucleotide binding
IEA molecular_function
GO:0001104 RNA polymerase II transcr
iption cofactor activity
IBA molecular_function
GO:0005634 nucleus
IBA cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0007005 mitochondrion organizatio
n
TAS biological_process
GO:0008134 transcription factor bind
ing
IBA molecular_function
GO:0030374 ligand-dependent nuclear
receptor transcription co
activator activity
IBA molecular_function
GO:0044822 poly(A) RNA binding
IDA molecular_function
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IBA biological_process
GO:0051091 positive regulation of se
quence-specific DNA bindi
ng transcription factor a
ctivity
IBA biological_process
GO:0000166 nucleotide binding
IEA molecular_function
GO:0001104 RNA polymerase II transcr
iption cofactor activity
IBA molecular_function
GO:0003676 nucleic acid binding
IEA molecular_function
GO:0003723 RNA binding
IEA molecular_function
GO:0005634 nucleus
IBA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0007005 mitochondrion organizatio
n
TAS biological_process
GO:0008134 transcription factor bind
ing
IBA molecular_function
GO:0030374 ligand-dependent nuclear
receptor transcription co
activator activity
IBA molecular_function
GO:0044822 poly(A) RNA binding
IDA molecular_function
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IBA biological_process
GO:0051091 positive regulation of se
quence-specific DNA bindi
ng transcription factor a
ctivity
IBA biological_process
GO:0001104 RNA polymerase II transcr
iption cofactor activity
IBA molecular_function
GO:0005634 nucleus
IBA cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0007005 mitochondrion organizatio
n
TAS biological_process
GO:0008134 transcription factor bind
ing
IBA molecular_function
GO:0030374 ligand-dependent nuclear
receptor transcription co
activator activity
IBA molecular_function
GO:0044822 poly(A) RNA binding
IDA molecular_function
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IBA biological_process
GO:0051091 positive regulation of se
quence-specific DNA bindi
ng transcription factor a
ctivity
IBA biological_process

Diseases

Associated diseases References
Alzheimer's disease PMID: 16385451
Diabetes PMID: 19209188
Endometriosis PMID: 3439444
Endometriosis INFBASE3439444

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
3439444 Endometrio
sis

14 patients wit
h endometriosis
Female infertility PRc
Erc
Show abstract