Endometriosis Knowledgebase


A repository for genes associated with endometriosis

Search Result


Gene id 2878
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol GPX3   Gene   UCSC   Ensembl
Aliases GPx-P, GSHPx-3, GSHPx-P
Gene name glutathione peroxidase 3
Alternate names glutathione peroxidase 3, GPx-3, extracellular glutathione peroxidase, glutathione peroxidase 3 (plasma), plasma glutathione peroxidase,
Gene location 5q33.1 (151020437: 151028992)     Exons: 5     NC_000005.10
Gene summary(Entrez) The protein encoded by this gene belongs to the glutathione peroxidase family, members of which catalyze the reduction of organic hydroperoxides and hydrogen peroxide (H2O2) by glutathione, and thereby protect cells against oxidative damage. Several isozymes of this gene family exist in vertebrates, which vary in cellular location and substrate specificity. This isozyme is secreted, and is abundantly found in plasma. Downregulation of expression of this gene by promoter hypermethylation has been observed in a wide spectrum of human malignancies, including thyroid cancer, hepatocellular carcinoma and chronic myeloid leukemia. This isozyme is also a selenoprotein, containing the rare amino acid selenocysteine (Sec) at its active site. Sec is encoded by the UGA codon, which normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jul 2016]
OMIM 138321

Protein Summary

Protein general information P22352  

Name: Glutathione peroxidase 3 (GPx 3) (GSHPx 3) (EC 1.11.1.9) (Extracellular glutathione peroxidase) (Plasma glutathione peroxidase) (GPx P) (GSHPx P)

Length: 226  Mass: 25,552

Tissue specificity: Secreted in plasma.

Sequence MARLLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGL
TGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYT
FLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALGVKR
K
Structural information
Interpro:  IPR000889 IPR029759 IPR029760 IPR012336
Prosite:   PS00460 PS00763 PS51355

Pfam:  
PF00255
CDD:   cd00340

PDB:  
2R37
PDBsum:   2R37
STRING:   ENSP00000373477;
Other Databases GeneCards:  GPX3;  Malacards:  GPX3

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000302 response to reactive oxyg
en species
TAS biological_process
GO:0004602 glutathione peroxidase ac
tivity
IDA molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0006982 response to lipid hydrope
roxide
TAS biological_process
GO:0008134 transcription factor bind
ing
TAS molecular_function
GO:0008430 selenium binding
IDA molecular_function
GO:0008430 selenium binding
IDA molecular_function
GO:0042744 hydrogen peroxide catabol
ic process
TAS biological_process
GO:0051289 protein homotetramerizati
on
IDA biological_process
GO:0055114 oxidation-reduction proce
ss
IEA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0098869 cellular oxidant detoxifi
cation
IEA biological_process
GO:0000302 response to reactive oxyg
en species
TAS biological_process
GO:0004601 peroxidase activity
IEA molecular_function
GO:0004602 glutathione peroxidase ac
tivity
IEA molecular_function
GO:0004602 glutathione peroxidase ac
tivity
IEA molecular_function
GO:0004602 glutathione peroxidase ac
tivity
IDA molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
IEA cellular_component
GO:0005576 extracellular region
IEA cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0006979 response to oxidative str
ess
IEA biological_process
GO:0006982 response to lipid hydrope
roxide
TAS biological_process
GO:0008134 transcription factor bind
ing
TAS molecular_function
GO:0008430 selenium binding
IDA molecular_function
GO:0008430 selenium binding
IDA molecular_function
GO:0016491 oxidoreductase activity
IEA molecular_function
GO:0042744 hydrogen peroxide catabol
ic process
IEA biological_process
GO:0042744 hydrogen peroxide catabol
ic process
TAS biological_process
GO:0051289 protein homotetramerizati
on
IDA biological_process
GO:0055114 oxidation-reduction proce
ss
IEA biological_process
GO:0055114 oxidation-reduction proce
ss
IEA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0098869 cellular oxidant detoxifi
cation
IEA biological_process
GO:0000302 response to reactive oxyg
en species
TAS biological_process
GO:0004602 glutathione peroxidase ac
tivity
IDA molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
EXP molecular_function
GO:0004602 glutathione peroxidase ac
tivity
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0006982 response to lipid hydrope
roxide
TAS biological_process
GO:0008134 transcription factor bind
ing
TAS molecular_function
GO:0008430 selenium binding
IDA molecular_function
GO:0008430 selenium binding
IDA molecular_function
GO:0042744 hydrogen peroxide catabol
ic process
TAS biological_process
GO:0051289 protein homotetramerizati
on
IDA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component

KEGG pathways

hsa00590  Arachidonic acid metabolism
hsa04918  Thyroid hormone synthesis
hsa00480  Glutathione metabolism

Diseases

Associated diseases References
Cancer PMID: 19692168
Chronic obstructive pulmonary disease (COPD) PMID: 19625176
Diabetes PMID: 12732844
Endometriosis PMID: 25376627
Female infertility PMID: 22999554
Ischemic heart disease PMID: 17122425
Polycystic ovary syndrome (PCOS) PMID: 24279306
Endometriosis INFBASE25376627

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
25376627 Endometrio
sis

65 (31 patients
with endometri
osis, 34 patien
ts without endo
metriosis)
Female infertility GPX3
IL6
IL8
TNF
TXN
TBPL2
Show abstract