Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 3284
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol HSD3B2   Gene   UCSC   Ensembl
Aliases HSD3B, HSDB, SDR11E2
Gene name hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
Alternate names 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2, 3 beta-HSD type II, 3 beta-hydroxysteroid dehydrogenase type II, delta 5-delta 4-isomerase type II, 3 beta-HSD type II, 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type II, 3-beta,
Gene location 1p12 (119414930: 119423038)     Exons: 5     NC_000001.11
Gene summary(Entrez) The protein encoded by this gene is a bifunctional enzyme that catalyzes the oxidative conversion of delta(5)-ene-3-beta-hydroxy steroid, and the oxidative conversion of ketosteroids. It plays a crucial role in the biosynthesis of all classes of hormonal steroids. This gene is predominantly expressed in the adrenals and the gonads. Mutations in this gene are associated with 3-beta-hydroxysteroid dehydrogenase, type II, deficiency. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Oct 2009]
OMIM 613890

Protein Summary

Protein general information P26439  

Name: 3 beta hydroxysteroid dehydrogenase/Delta 5 >4 isomerase type 2 (3 beta hydroxysteroid dehydrogenase/Delta 5 >4 isomerase type II) (3 beta HSD II) (3 beta HSD adrenal and gonadal type) [Includes: 3 beta hydroxy Delta(5) steroid dehydrogenase (EC 1.1.1.1

Length: 372  Mass: 42,052

Tissue specificity: Expressed in adrenal gland, testis and ovary.

Sequence MGWSCLVTGAGGLLGQRIVRLLVEEKELKEIRALDKAFRPELREEFSKLQNRTKLTVLEGDILDEPFLKRACQDV
SVVIHTACIIDVFGVTHRESIMNVNVKGTQLLLEACVQASVPVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTW
PTPYPYSKKLAEKAVLAANGWNLKNGDTLYTCALRPTYIYGEGGPFLSASINEALNNNGILSSVGKFSTVNPVYV
GNVAWAHILALRALRDPKKAPSVRGQFYYISDDTPHQSYDNLNYILSKEFGLRLDSRWSLPLTLMYWIGFLLEVV
SFLLSPIYSYQPPFNRHTVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAKQKTVEWVGSLVDRHKETLKSKTQ
Structural information
Interpro:  IPR002225 IPR016040

Pfam:  
PF01073
STRING:   ENSP00000358424;
Other Databases GeneCards:  HSD3B2;  Malacards:  HSD3B2

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
IDA molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
TAS molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
IDA molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0005743 mitochondrial inner membr
ane
ISS cellular_component
GO:0005758 mitochondrial intermembra
ne space
ISS cellular_component
GO:0005783 endoplasmic reticulum
NAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0006694 steroid biosynthetic proc
ess
IDA biological_process
GO:0006702 androgen biosynthetic pro
cess
TAS biological_process
GO:0006704 glucocorticoid biosynthet
ic process
TAS biological_process
GO:0006705 mineralocorticoid biosynt
hetic process
TAS biological_process
GO:0016021 integral component of mem
brane
NAS cellular_component
GO:0030868 smooth endoplasmic reticu
lum membrane
ISS cellular_component
GO:0031966 mitochondrial membrane
NAS cellular_component
GO:0055114 oxidation-reduction proce
ss
IEA biological_process
GO:0003824 catalytic activity
IEA molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
IEA molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
IEA molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
IDA molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
TAS molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
IEA molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
IDA molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0005739 mitochondrion
IEA cellular_component
GO:0005743 mitochondrial inner membr
ane
ISS cellular_component
GO:0005758 mitochondrial intermembra
ne space
ISS cellular_component
GO:0005783 endoplasmic reticulum
IEA cellular_component
GO:0005783 endoplasmic reticulum
NAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
IEA cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0006694 steroid biosynthetic proc
ess
IEA biological_process
GO:0006694 steroid biosynthetic proc
ess
IEA biological_process
GO:0006694 steroid biosynthetic proc
ess
IEA biological_process
GO:0006694 steroid biosynthetic proc
ess
IDA biological_process
GO:0006702 androgen biosynthetic pro
cess
TAS biological_process
GO:0006704 glucocorticoid biosynthet
ic process
TAS biological_process
GO:0006705 mineralocorticoid biosynt
hetic process
TAS biological_process
GO:0008152 metabolic process
IEA biological_process
GO:0016020 membrane
IEA cellular_component
GO:0016021 integral component of mem
brane
IEA cellular_component
GO:0016021 integral component of mem
brane
NAS cellular_component
GO:0016491 oxidoreductase activity
IEA molecular_function
GO:0016616 oxidoreductase activity,
acting on the CH-OH group
of donors, NAD or NADP a
s acceptor
IEA molecular_function
GO:0016853 isomerase activity
IEA molecular_function
GO:0030868 smooth endoplasmic reticu
lum membrane
ISS cellular_component
GO:0031966 mitochondrial membrane
IEA cellular_component
GO:0031966 mitochondrial membrane
NAS cellular_component
GO:0055114 oxidation-reduction proce
ss
IEA biological_process
GO:0055114 oxidation-reduction proce
ss
IEA biological_process
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
IDA molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
TAS molecular_function
GO:0003854 3-beta-hydroxy-delta5-ste
roid dehydrogenase activi
ty
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
IDA molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0004769 steroid delta-isomerase a
ctivity
TAS molecular_function
GO:0005743 mitochondrial inner membr
ane
ISS cellular_component
GO:0005758 mitochondrial intermembra
ne space
ISS cellular_component
GO:0005783 endoplasmic reticulum
NAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0005789 endoplasmic reticulum mem
brane
TAS cellular_component
GO:0006694 steroid biosynthetic proc
ess
IDA biological_process
GO:0006702 androgen biosynthetic pro
cess
TAS biological_process
GO:0006704 glucocorticoid biosynthet
ic process
TAS biological_process
GO:0006705 mineralocorticoid biosynt
hetic process
TAS biological_process
GO:0016021 integral component of mem
brane
NAS cellular_component
GO:0030868 smooth endoplasmic reticu
lum membrane
ISS cellular_component
GO:0031966 mitochondrial membrane
NAS cellular_component

KEGG pathways

hsa01100  Metabolic pathways
hsa00140  Steroid hormone biosynthesis
hsa04913  Ovarian steroidogenesis
hsa04925  Aldosterone synthesis and secretion

Diseases

Associated diseases References
Adrenal hyperplasia OMIM: 613890
Cancer PMID: 19574343
Chronic obstructive pulmonary disease (COPD) PMID: 19625176
Congenital adrenal hyperplasia KEGG: H00216
Endometrial cancer PMID: 19022561
Endometriosis PMID: 19001523
Hirsutism PMID: 15585552
Hyperandrogenism PMID: 11287026
Hyperandrogenism PMID: 25256274
Hypospadias PMID: 14764821
Male pseudohermaphroditism (MPH) PMID: 8185809
Polycystic ovary syndrome (PCOS) PMID: 14764797
Endometriosis INFBASE19001523
Primary ciliary dyskinesia KEGG: H00564
Sertoli cell-only syndrome (SCOS) PMID: 18082732

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
19001523 Endometrio
sis


StAR
side chain cleavage P450
3beta-hydroxysteroid-dehydrogenase-2
17-hydroxylase/17-20-lyase
aromatase
SF1
COUP-TFII
WT1
Show abstract