Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 388585
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol HES5   Gene   UCSC   Ensembl
Aliases bHLHb38
Gene name hes family bHLH transcription factor 5
Alternate names transcription factor HES-5, class B basic helix-loop-helix protein 38, hairy and enhancer of split 5,
Gene location 1p36.32 (2530553: 2528744)     Exons: 2     NC_000001.11
Gene summary(Entrez) This gene encodes a member of a family of basic helix-loop-helix transcriptional repressors. The protein product of this gene, which is activated downstream of the Notch pathway, regulates cell differentiation in multiple tissues. Disruptions in the normal expression of this gene have been associated with developmental diseases and cancer. [provided by RefSeq, Dec 2008]
OMIM 607348

Protein Summary

Protein general information Q5TA89  

Name: Transcription factor HES 5 (Class B basic helix loop helix protein 38) (bHLHb38) (Hairy and enhancer of split 5)

Length: 166  Mass: 18,226

Tissue specificity: Expressed in fetal heart and brain tumors. {ECO

Sequence MAPSTVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPNSKLEKADILEMAVSYLKHSKAF
VAAAGPKSLHQDYSEGYSWCLQEAVQFLTLHAASDTQMKLLYHFQRPPAAPAAPAKEPKAPGAAPPPALSAKATA
AAAAAHQPACGLWRPW
Structural information
Protein Domains
bHLH. (16-72)
Orange. (88-119)

Motifs
WRPW motif.(163-166)
Interpro:  IPR011598 IPR003650
Prosite:   PS50888 PS51054

Pfam:  
PF07527 PF00010
CDD:   cd00083
STRING:   ENSP00000367714;
Other Databases GeneCards:  HES5;  Malacards:  HES5

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
ISS biological_process
GO:0001078 transcriptional repressor
activity, RNA polymerase
II core promoter proxima
l region sequence-specifi
c binding
ISS molecular_function
GO:0003682 chromatin binding
IEA molecular_function
GO:0003690 double-stranded DNA bindi
ng
IEA molecular_function
GO:0005575 cellular_component
ND cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0006461 protein complex assembly
ISS biological_process
GO:0007155 cell adhesion
ISS biological_process
GO:0007219 Notch signaling pathway
IMP biological_process
GO:0007219 Notch signaling pathway
IMP biological_process
GO:0007219 Notch signaling pathway
TAS biological_process
GO:0007224 smoothened signaling path
way
ISS biological_process
GO:0007420 brain development
ISS biological_process
GO:0008134 transcription factor bind
ing
NAS molecular_function
GO:0008284 positive regulation of ce
ll proliferation
IMP biological_process
GO:0014003 oligodendrocyte developme
nt
ISS biological_process
GO:0021537 telencephalon development
ISS biological_process
GO:0021781 glial cell fate commitmen
t
ISS biological_process
GO:0021861 forebrain radial glial ce
ll differentiation
IEA biological_process
GO:0021915 neural tube development
ISS biological_process
GO:0022010 central nervous system my
elination
ISS biological_process
GO:0030513 positive regulation of BM
P signaling pathway
ISS biological_process
GO:0031641 regulation of myelination
ISS biological_process
GO:0042491 auditory receptor cell di
fferentiation
ISS biological_process
GO:0042517 positive regulation of ty
rosine phosphorylation of
Stat3 protein
ISS biological_process
GO:0042668 auditory receptor cell fa
te determination
IEA biological_process
GO:0043010 camera-type eye developme
nt
ISS biological_process
GO:0045595 regulation of cell differ
entiation
ISS biological_process
GO:0045607 regulation of auditory re
ceptor cell differentiati
on
IEA biological_process
GO:0045665 negative regulation of ne
uron differentiation
ISS biological_process
GO:0045747 positive regulation of No
tch signaling pathway
IEA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IEA biological_process
GO:0046427 positive regulation of JA
K-STAT cascade
ISS biological_process
GO:0046983 protein dimerization acti
vity
IEA molecular_function
GO:0048469 cell maturation
ISS biological_process
GO:0048661 positive regulation of sm
ooth muscle cell prolifer
ation
IGI biological_process
GO:0048708 astrocyte differentiation
ISS biological_process
GO:0048712 negative regulation of as
trocyte differentiation
ISS biological_process
GO:0048715 negative regulation of ol
igodendrocyte differentia
tion
ISS biological_process
GO:0050678 regulation of epithelial
cell proliferation
IEA biological_process
GO:0050767 regulation of neurogenesi
s
ISS biological_process
GO:0051216 cartilage development
IDA biological_process
GO:0060122 inner ear receptor stereo
cilium organization
IEA biological_process
GO:0072049 comma-shaped body morphog
enesis
IEA biological_process
GO:0072050 S-shaped body morphogenes
is
IEA biological_process
GO:0072086 specification of loop of
Henle identity
IEA biological_process
GO:0072282 metanephric nephron tubul
e morphogenesis
IEA biological_process
GO:0090162 establishment of epitheli
al cell polarity
IEA biological_process
GO:0097150 neuronal stem cell popula
tion maintenance
IEP biological_process
GO:2000737 negative regulation of st
em cell differentiation
IMP biological_process
GO:2000974 negative regulation of pr
o-B cell differentiation
ISS biological_process
GO:2000978 negative regulation of fo
rebrain neuron differenti
ation
IEA biological_process
GO:2000981 negative regulation of in
ner ear receptor cell dif
ferentiation
IEA biological_process
GO:0002062 chondrocyte differentiati
on
ISS biological_process
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
IEA biological_process
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
ISS biological_process
GO:0001078 transcriptional repressor
activity, RNA polymerase
II core promoter proxima
l region sequence-specifi
c binding
IEA molecular_function
GO:0001078 transcriptional repressor
activity, RNA polymerase
II core promoter proxima
l region sequence-specifi
c binding
ISS molecular_function
GO:0003677 DNA binding
IEA molecular_function
GO:0003677 DNA binding
IEA molecular_function
GO:0003682 chromatin binding
IEA molecular_function
GO:0003690 double-stranded DNA bindi
ng
IEA molecular_function
GO:0005575 cellular_component
ND cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006461 protein complex assembly
IEA biological_process
GO:0006461 protein complex assembly
ISS biological_process
GO:0007155 cell adhesion
IEA biological_process
GO:0007155 cell adhesion
ISS biological_process
GO:0007219 Notch signaling pathway
IEA biological_process
GO:0007219 Notch signaling pathway
IMP biological_process
GO:0007219 Notch signaling pathway
IMP biological_process
GO:0007219 Notch signaling pathway
TAS biological_process
GO:0007224 smoothened signaling path
way
IEA biological_process
GO:0007224 smoothened signaling path
way
ISS biological_process
GO:0007275 multicellular organism de
velopment
IEA biological_process
GO:0007399 nervous system developmen
t
IEA biological_process
GO:0007420 brain development
IEA biological_process
GO:0007420 brain development
ISS biological_process
GO:0008134 transcription factor bind
ing
NAS molecular_function
GO:0008284 positive regulation of ce
ll proliferation
IMP biological_process
GO:0014003 oligodendrocyte developme
nt
IEA biological_process
GO:0014003 oligodendrocyte developme
nt
ISS biological_process
GO:0021537 telencephalon development
IEA biological_process
GO:0021537 telencephalon development
ISS biological_process
GO:0021781 glial cell fate commitmen
t
IEA biological_process
GO:0021781 glial cell fate commitmen
t
ISS biological_process
GO:0021861 forebrain radial glial ce
ll differentiation
IEA biological_process
GO:0021915 neural tube development
IEA biological_process
GO:0021915 neural tube development
ISS biological_process
GO:0022010 central nervous system my
elination
IEA biological_process
GO:0022010 central nervous system my
elination
ISS biological_process
GO:0030154 cell differentiation
IEA biological_process
GO:0030182 neuron differentiation
IEA biological_process
GO:0030513 positive regulation of BM
P signaling pathway
IEA biological_process
GO:0030513 positive regulation of BM
P signaling pathway
ISS biological_process
GO:0031641 regulation of myelination
IEA biological_process
GO:0031641 regulation of myelination
ISS biological_process
GO:0042491 auditory receptor cell di
fferentiation
IEA biological_process
GO:0042491 auditory receptor cell di
fferentiation
ISS biological_process
GO:0042517 positive regulation of ty
rosine phosphorylation of
Stat3 protein
IEA biological_process
GO:0042517 positive regulation of ty
rosine phosphorylation of
Stat3 protein
ISS biological_process
GO:0042668 auditory receptor cell fa
te determination
IEA biological_process
GO:0043010 camera-type eye developme
nt
IEA biological_process
GO:0043010 camera-type eye developme
nt
ISS biological_process
GO:0045595 regulation of cell differ
entiation
IEA biological_process
GO:0045595 regulation of cell differ
entiation
ISS biological_process
GO:0045607 regulation of auditory re
ceptor cell differentiati
on
IEA biological_process
GO:0045665 negative regulation of ne
uron differentiation
IEA biological_process
GO:0045665 negative regulation of ne
uron differentiation
ISS biological_process
GO:0045747 positive regulation of No
tch signaling pathway
IEA biological_process
GO:0045892 negative regulation of tr
anscription, DNA-template
d
IEA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IEA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IEA biological_process
GO:0046427 positive regulation of JA
K-STAT cascade
IEA biological_process
GO:0046427 positive regulation of JA
K-STAT cascade
ISS biological_process
GO:0046983 protein dimerization acti
vity
IEA molecular_function
GO:0048469 cell maturation
IEA biological_process
GO:0048469 cell maturation
ISS biological_process
GO:0048661 positive regulation of sm
ooth muscle cell prolifer
ation
IGI biological_process
GO:0048708 astrocyte differentiation
IEA biological_process
GO:0048708 astrocyte differentiation
ISS biological_process
GO:0048712 negative regulation of as
trocyte differentiation
IEA biological_process
GO:0048712 negative regulation of as
trocyte differentiation
ISS biological_process
GO:0048715 negative regulation of ol
igodendrocyte differentia
tion
IEA biological_process
GO:0048715 negative regulation of ol
igodendrocyte differentia
tion
ISS biological_process
GO:0050678 regulation of epithelial
cell proliferation
IEA biological_process
GO:0050767 regulation of neurogenesi
s
IEA biological_process
GO:0050767 regulation of neurogenesi
s
ISS biological_process
GO:0051216 cartilage development
IEA biological_process
GO:0051216 cartilage development
IDA biological_process
GO:0060122 inner ear receptor stereo
cilium organization
IEA biological_process
GO:0072049 comma-shaped body morphog
enesis
IEA biological_process
GO:0072050 S-shaped body morphogenes
is
IEA biological_process
GO:0072086 specification of loop of
Henle identity
IEA biological_process
GO:0072282 metanephric nephron tubul
e morphogenesis
IEA biological_process
GO:0090162 establishment of epitheli
al cell polarity
IEA biological_process
GO:0097150 neuronal stem cell popula
tion maintenance
IEA biological_process
GO:0097150 neuronal stem cell popula
tion maintenance
IEP biological_process
GO:2000737 negative regulation of st
em cell differentiation
IMP biological_process
GO:2000974 negative regulation of pr
o-B cell differentiation
IEA biological_process
GO:2000974 negative regulation of pr
o-B cell differentiation
ISS biological_process
GO:2000978 negative regulation of fo
rebrain neuron differenti
ation
IEA biological_process
GO:2000981 negative regulation of in
ner ear receptor cell dif
ferentiation
IEA biological_process
GO:0002062 chondrocyte differentiati
on
ISS biological_process
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
ISS biological_process
GO:0001078 transcriptional repressor
activity, RNA polymerase
II core promoter proxima
l region sequence-specifi
c binding
ISS molecular_function
GO:0005575 cellular_component
ND cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0006461 protein complex assembly
ISS biological_process
GO:0007155 cell adhesion
ISS biological_process
GO:0007219 Notch signaling pathway
IMP biological_process
GO:0007219 Notch signaling pathway
IMP biological_process
GO:0007219 Notch signaling pathway
TAS biological_process
GO:0007224 smoothened signaling path
way
ISS biological_process
GO:0007420 brain development
ISS biological_process
GO:0008134 transcription factor bind
ing
NAS molecular_function
GO:0008284 positive regulation of ce
ll proliferation
IMP biological_process
GO:0014003 oligodendrocyte developme
nt
ISS biological_process
GO:0021537 telencephalon development
ISS biological_process
GO:0021781 glial cell fate commitmen
t
ISS biological_process
GO:0021915 neural tube development
ISS biological_process
GO:0022010 central nervous system my
elination
ISS biological_process
GO:0030513 positive regulation of BM
P signaling pathway
ISS biological_process
GO:0031641 regulation of myelination
ISS biological_process
GO:0042491 auditory receptor cell di
fferentiation
ISS biological_process
GO:0042517 positive regulation of ty
rosine phosphorylation of
Stat3 protein
ISS biological_process
GO:0043010 camera-type eye developme
nt
ISS biological_process
GO:0045595 regulation of cell differ
entiation
ISS biological_process
GO:0045665 negative regulation of ne
uron differentiation
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0046427 positive regulation of JA
K-STAT cascade
ISS biological_process
GO:0048469 cell maturation
ISS biological_process
GO:0048661 positive regulation of sm
ooth muscle cell prolifer
ation
IGI biological_process
GO:0048708 astrocyte differentiation
ISS biological_process
GO:0048712 negative regulation of as
trocyte differentiation
ISS biological_process
GO:0048715 negative regulation of ol
igodendrocyte differentia
tion
ISS biological_process
GO:0050767 regulation of neurogenesi
s
ISS biological_process
GO:0051216 cartilage development
IDA biological_process
GO:0097150 neuronal stem cell popula
tion maintenance
IEP biological_process
GO:2000737 negative regulation of st
em cell differentiation
IMP biological_process
GO:2000974 negative regulation of pr
o-B cell differentiation
ISS biological_process
GO:0002062 chondrocyte differentiati
on
ISS biological_process

KEGG pathways

hsa05224  Breast cancer
hsa04330  Notch signaling pathway

Diseases

Associated diseases References
Endometriosis PMID: 25546156
Endometriosis INFBASE25546156

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
25546156 Endometrio
sis


Female infertility NOTCH1
NOTCH4
JAGGED2
DLL4
HES5
HEY1
Show abstract