Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 3958
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol LGALS3   Gene   UCSC   Ensembl
Aliases CBP35, GAL3, GALBP, GALIG, L31, LGALS2, MAC2
Gene name galectin 3
Alternate names galectin-3, 35 kDa lectin, IgE-binding protein, MAC-2 antigen, advanced glycation end-product receptor 3, carbohydrate-binding protein 35, galactose-specific lectin 3, laminin-binding protein, lectin L-29, lectin, galactoside-binding, soluble, 3,
Gene location 14q22.3 (55129216: 55145429)     Exons: 7     NC_000014.9
Gene summary(Entrez) This gene encodes a member of the galectin family of carbohydrate binding proteins. Members of this protein family have an affinity for beta-galactosides. The encoded protein is characterized by an N-terminal proline-rich tandem repeat domain and a single C-terminal carbohydrate recognition domain. This protein can self-associate through the N-terminal domain allowing it to bind to multivalent saccharide ligands. This protein localizes to the extracellular matrix, the cytoplasm and the nucleus. This protein plays a role in numerous cellular functions including apoptosis, innate immunity, cell adhesion and T-cell regulation. The protein exhibits antimicrobial activity against bacteria and fungi. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Oct 2014]
OMIM 153619

Protein Summary

Protein general information P17931  

Name: Galectin 3 (Gal 3) (35 kDa lectin) (Carbohydrate binding protein 35) (CBP 35) (Galactose specific lectin 3) (Galactoside binding protein) (GALBP) (IgE binding protein) (L 31) (Laminin binding protein) (Lectin L 29) (Mac 2 antigen)

Length: 250  Mass: 26,152

Tissue specificity: A major expression is found in the colonic epithelium. It is also abundant in the activated macrophages. Expressed in fetal membranes. {ECO

Sequence MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPA
PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQ
RGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRV
KKLNEISKLGISGDIDLTSASYTMI
Structural information
Protein Domains
Galectin. (118-248)

Motifs
Nuclear export(226-241)
Interpro:  IPR013320 IPR015534 IPR001079
Prosite:   PS51304

Pfam:  
PF00337

PDB:  
1A3K 1KJL 1KJR 2NMN 2NMO 2NN8 2XG3 3AYA 3AYC 3AYD 3AYE 3T1L 3T1M 3ZSJ 3ZSK 3ZSL 3ZSM 4BLI 4BLJ 4BM8 4JC1 4JCK 4LBJ 4LBK 4LBL 4LBM 4LBN 4LBO 4R9A 4R9B 4R9C 4R9D 4RL7 4XBN 5E88 5E89 5E8A 5EXO 5H9P 5H9R 5IUQ
PDBsum:   1A3K 1KJL 1KJR 2NMN 2NMO 2NN8 2XG3 3AYA 3AYC 3AYD 3AYE 3T1L 3T1M 3ZSJ 3ZSK 3ZSL 3ZSM 4BLI 4BLJ 4BM8 4JC1 4JCK 4LBJ 4LBK 4LBL 4LBM 4LBN 4LBO 4R9A 4R9B 4R9C 4R9D 4RL7 4XBN 5E88 5E89 5E8A 5EXO 5H9P 5H9R 5IUQ

DIP:  
45623
STRING:   ENSP00000254301;
Other Databases GeneCards:  LGALS3;  Malacards:  LGALS3

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0001772 immunological synapse
IDA cellular_component
GO:0002548 monocyte chemotaxis
IDA biological_process
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005615 extracellular space
IDA cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005681 spliceosomal complex
IEA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005743 mitochondrial inner membr
ane
IDA cellular_component
GO:0005886 plasma membrane
TAS cellular_component
GO:0006397 mRNA processing
IEA biological_process
GO:0008380 RNA splicing
IEA biological_process
GO:0016020 membrane
IDA cellular_component
GO:0019863 IgE binding
IDA molecular_function
GO:0030246 carbohydrate binding
IEA molecular_function
GO:0030593 neutrophil chemotaxis
IDA biological_process
GO:0030855 epithelial cell different
iation
IEP biological_process
GO:0042056 chemoattractant activity
IDA molecular_function
GO:0042129 regulation of T cell prol
iferation
IMP biological_process
GO:0043236 laminin binding
IDA molecular_function
GO:0044822 poly(A) RNA binding
IDA molecular_function
GO:0045087 innate immune response
IEA biological_process
GO:0045806 negative regulation of en
docytosis
IDA biological_process
GO:0048245 eosinophil chemotaxis
IDA biological_process
GO:0048246 macrophage chemotaxis
IDA biological_process
GO:0050860 negative regulation of T
cell receptor signaling p
athway
ISS biological_process
GO:0050918 positive chemotaxis
IDA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070232 regulation of T cell apop
totic process
IDA biological_process
GO:0071674 mononuclear cell migratio
n
IDA biological_process
GO:0071677 positive regulation of mo
nonuclear cell migration
IDA biological_process
GO:0090280 positive regulation of ca
lcium ion import
IDA biological_process
GO:1902041 regulation of extrinsic a
poptotic signaling pathwa
y via death domain recept
ors
IMP biological_process
GO:2000521 negative regulation of im
munological synapse forma
tion
ISS biological_process
GO:2001189 negative regulation of T
cell activation via T cel
l receptor contact with a
ntigen bound to MHC molec
ule on antigen presenting
cell
ISS biological_process
GO:2001237 negative regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001200 positive regulation of de
ndritic cell differentiat
ion
IDA biological_process
GO:0031012 extracellular matrix
IDA cellular_component
GO:0001772 immunological synapse
IDA cellular_component
GO:0002376 immune system process
IEA biological_process
GO:0002548 monocyte chemotaxis
IDA biological_process
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
IEA cellular_component
GO:0005576 extracellular region
IEA cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005681 spliceosomal complex
IEA cellular_component
GO:0005737 cytoplasm
IEA cellular_component
GO:0005737 cytoplasm
IEA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005743 mitochondrial inner membr
ane
IDA cellular_component
GO:0005886 plasma membrane
TAS cellular_component
GO:0006397 mRNA processing
IEA biological_process
GO:0008380 RNA splicing
IEA biological_process
GO:0016020 membrane
IDA cellular_component
GO:0019863 IgE binding
IEA molecular_function
GO:0019863 IgE binding
IDA molecular_function
GO:0030154 cell differentiation
IEA biological_process
GO:0030246 carbohydrate binding
IEA molecular_function
GO:0030246 carbohydrate binding
IEA molecular_function
GO:0030246 carbohydrate binding
TAS molecular_function
GO:0030593 neutrophil chemotaxis
IDA biological_process
GO:0030855 epithelial cell different
iation
IEP biological_process
GO:0042056 chemoattractant activity
IDA molecular_function
GO:0042129 regulation of T cell prol
iferation
IMP biological_process
GO:0043236 laminin binding
IDA molecular_function
GO:0044822 poly(A) RNA binding
IDA molecular_function
GO:0045087 innate immune response
IEA biological_process
GO:0045806 negative regulation of en
docytosis
IDA biological_process
GO:0048245 eosinophil chemotaxis
IDA biological_process
GO:0048246 macrophage chemotaxis
IDA biological_process
GO:0050860 negative regulation of T
cell receptor signaling p
athway
ISS biological_process
GO:0050918 positive chemotaxis
IDA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070232 regulation of T cell apop
totic process
IDA biological_process
GO:0071674 mononuclear cell migratio
n
IDA biological_process
GO:0071677 positive regulation of mo
nonuclear cell migration
IDA biological_process
GO:0090280 positive regulation of ca
lcium ion import
IDA biological_process
GO:1902041 regulation of extrinsic a
poptotic signaling pathwa
y via death domain recept
ors
IMP biological_process
GO:2000521 negative regulation of im
munological synapse forma
tion
ISS biological_process
GO:2001189 negative regulation of T
cell activation via T cel
l receptor contact with a
ntigen bound to MHC molec
ule on antigen presenting
cell
ISS biological_process
GO:2001237 negative regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001200 positive regulation of de
ndritic cell differentiat
ion
IDA biological_process
GO:0031012 extracellular matrix
IDA cellular_component
GO:0001772 immunological synapse
IDA cellular_component
GO:0002548 monocyte chemotaxis
IDA biological_process
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005615 extracellular space
IDA cellular_component
GO:0005615 extracellular space
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005743 mitochondrial inner membr
ane
IDA cellular_component
GO:0005886 plasma membrane
TAS cellular_component
GO:0016020 membrane
IDA cellular_component
GO:0019863 IgE binding
IDA molecular_function
GO:0030246 carbohydrate binding
TAS molecular_function
GO:0030593 neutrophil chemotaxis
IDA biological_process
GO:0030855 epithelial cell different
iation
IEP biological_process
GO:0042056 chemoattractant activity
IDA molecular_function
GO:0042129 regulation of T cell prol
iferation
IMP biological_process
GO:0043236 laminin binding
IDA molecular_function
GO:0044822 poly(A) RNA binding
IDA molecular_function
GO:0045806 negative regulation of en
docytosis
IDA biological_process
GO:0048245 eosinophil chemotaxis
IDA biological_process
GO:0048246 macrophage chemotaxis
IDA biological_process
GO:0050860 negative regulation of T
cell receptor signaling p
athway
ISS biological_process
GO:0050918 positive chemotaxis
IDA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070062 extracellular exosome
IDA cellular_component
GO:0070232 regulation of T cell apop
totic process
IDA biological_process
GO:0071674 mononuclear cell migratio
n
IDA biological_process
GO:0071677 positive regulation of mo
nonuclear cell migration
IDA biological_process
GO:0090280 positive regulation of ca
lcium ion import
IDA biological_process
GO:1902041 regulation of extrinsic a
poptotic signaling pathwa
y via death domain recept
ors
IMP biological_process
GO:2000521 negative regulation of im
munological synapse forma
tion
ISS biological_process
GO:2001189 negative regulation of T
cell activation via T cel
l receptor contact with a
ntigen bound to MHC molec
ule on antigen presenting
cell
ISS biological_process
GO:2001237 negative regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001200 positive regulation of de
ndritic cell differentiat
ion
IDA biological_process
GO:0031012 extracellular matrix
IDA cellular_component

Diseases

Associated diseases References
Cancer PMID: 17221114
Endometriosis PMID: 25069762
Hyperandrogenism PMID: 24497217
Polycystic ovary syndrome (PCOS) PMID: 24497217
Endometriosis INFBASE21030859

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
25069762 Endometrio
sis

23 (15 women af
fected by endom
etriosis, 8 con
trols)
Gal-3
ST2
Show abstract
21030859 Endometrio
sis

84 (50 cases of
endometriosis
(peritoneal end
ometriosis: n=1
0; ovarian endo
metriosis: n=10
; deeply infilt
rating endometr
iosis: n=30), 3
4 cases of euto
pic endometrium
(10 without en
dometriosis and
24 with endome
triosis))
gal-3
Show abstract