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A repository for genes associated with endometriosis

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Gene id 4321
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol MMP12   Gene   UCSC   Ensembl
Aliases HME, ME, MME, MMP-12
Gene name matrix metallopeptidase 12
Alternate names macrophage metalloelastase, matrix metallopeptidase 12 (macrophage elastase), matrix metalloproteinase 12 (macrophage elastase),
Gene location 11q22.2 (102875033: 102862728)     Exons: 10     NC_000011.10
Gene summary(Entrez) This gene encodes a member of the peptidase M10 family of matrix metalloproteinases (MMPs). Proteins in this family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. The encoded preproprotein is proteolytically processed to generate the mature protease. This protease degrades soluble and insoluble elastin. This gene may play a role in aneurysm formation and mutations in this gene are associated with lung function and chronic obstructive pulmonary disease (COPD). This gene is part of a cluster of MMP genes on chromosome 11. [provided by RefSeq, Jan 2016]
OMIM 601046

Protein Summary

Protein general information P39900  

Name: Macrophage metalloelastase (MME) (EC 3.4.24.65) (Macrophage elastase) (ME) (hME) (Matrix metalloproteinase 12) (MMP 12)

Length: 470  Mass: 54,002

Tissue specificity: Found in alveolar macrophages but not in peripheral blood monocytes.

Sequence MKFLLILLLQATASGALPLNSSTSLEKNNVLFGERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKV
TGQLDTSTLEMMHAPRCGVPDVHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFS
KINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSGGTNLFLTAVHEIGHSLG
LGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRLPNPDNSEPALCDPNLSFDAVTTVGNKIFF
FKDRFFWLKVSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPN
FVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQFE
YDFLLQRITKTLKSNSWFGC
Structural information

Motifs
Cysteine switch.(90-97)
Interpro:  IPR000585 IPR018487 IPR018486 IPR033739 IPR024079 IPR028718 IPR001818 IPR021190 IPR016293 IPR021158 IPR006026 IPR002477
Prosite:   PS00546 PS00024 PS51642 PS00142

Pfam:  
PF00045 PF00413 PF01471
CDD:   cd00094 cd04278

PDB:  
1JIZ 1JK3 1OS2 1OS9 1RMZ 1ROS 1UTT 1UTZ 1Y93 1YCM 1Z3J 2HU6 2JXY 2K2G 2K9C 2KRJ 2MLR 2MLS 2N8R 2OXU 2OXW 2OXZ 2POJ 2W0D 2WO8 2WO9 2WOA 2Z2D 3BA0 3EHX 3EHY 3F15 3F16 3F17 3F18 3F19 3F1A 3LIK 3LIL 3LIR 3LJG 3LK8 3LKA 3N2U 3N2V 3NX7 3RTS 3RTT 3TS4 3TSK 3UVC
PDBsum:   1JIZ 1JK3 1OS2 1OS9 1RMZ 1ROS 1UTT 1UTZ 1Y93 1YCM 1Z3J 2HU6 2JXY 2K2G 2K9C 2KRJ 2MLR 2MLS 2N8R 2OXU 2OXW 2OXZ 2POJ 2W0D 2WO8 2WO9 2WOA 2Z2D 3BA0 3EHX 3EHY 3F15 3F16 3F17 3F18 3F19 3F1A 3LIK 3LIL 3LIR 3LJG 3LK8 3LKA 3N2U 3N2V 3NX7 3RTS 3RTT 3TS4 3TSK 3UVC
MINT:   7709562
Other Databases GeneCards:  MMP12;  Malacards:  MMP12

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0004175 endopeptidase activity
TAS molecular_function
GO:0004222 metalloendopeptidase acti
vity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0005509 calcium ion binding
IEA molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005578 proteinaceous extracellul
ar matrix
IEA cellular_component
GO:0006508 proteolysis
IEA biological_process
GO:0008270 zinc ion binding
IEA molecular_function
GO:0014070 response to organic cycli
c compound
IEA biological_process
GO:0022617 extracellular matrix disa
ssembly
TAS biological_process
GO:0030574 collagen catabolic proces
s
TAS biological_process
GO:0035313 wound healing, spreading
of epidermal cells
IDA biological_process
GO:0042493 response to drug
IEA biological_process
GO:0060054 positive regulation of ep
ithelial cell proliferati
on involved in wound heal
ing
IDA biological_process
GO:0004175 endopeptidase activity
TAS molecular_function
GO:0004222 metalloendopeptidase acti
vity
IEA molecular_function
GO:0004222 metalloendopeptidase acti
vity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0005509 calcium ion binding
IEA molecular_function
GO:0005576 extracellular region
IEA cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005578 proteinaceous extracellul
ar matrix
IEA cellular_component
GO:0005578 proteinaceous extracellul
ar matrix
IEA cellular_component
GO:0006508 proteolysis
IEA biological_process
GO:0006508 proteolysis
IEA biological_process
GO:0006508 proteolysis
TAS biological_process
GO:0008233 peptidase activity
IEA molecular_function
GO:0008237 metallopeptidase activity
IEA molecular_function
GO:0008237 metallopeptidase activity
IEA molecular_function
GO:0008270 zinc ion binding
IEA molecular_function
GO:0008270 zinc ion binding
TAS molecular_function
GO:0014070 response to organic cycli
c compound
IEA biological_process
GO:0016787 hydrolase activity
IEA molecular_function
GO:0022617 extracellular matrix disa
ssembly
TAS biological_process
GO:0030574 collagen catabolic proces
s
TAS biological_process
GO:0031012 extracellular matrix
IEA cellular_component
GO:0035313 wound healing, spreading
of epidermal cells
IDA biological_process
GO:0042060 wound healing
IEA biological_process
GO:0042493 response to drug
IEA biological_process
GO:0046872 metal ion binding
IEA molecular_function
GO:0050679 positive regulation of ep
ithelial cell proliferati
on
IEA biological_process
GO:0060054 positive regulation of ep
ithelial cell proliferati
on involved in wound heal
ing
IDA biological_process
GO:0004175 endopeptidase activity
TAS molecular_function
GO:0004222 metalloendopeptidase acti
vity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0004252 serine-type endopeptidase
activity
TAS molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0006508 proteolysis
TAS biological_process
GO:0008270 zinc ion binding
TAS molecular_function
GO:0022617 extracellular matrix disa
ssembly
TAS biological_process
GO:0030574 collagen catabolic proces
s
TAS biological_process
GO:0035313 wound healing, spreading
of epidermal cells
IDA biological_process
GO:0060054 positive regulation of ep
ithelial cell proliferati
on involved in wound heal
ing
IDA biological_process

Diseases

Associated diseases References
Amyotrophic lateral sclerosis (ALS) PMID: 18608101
Aortic aneurysm PMID: 11546917
Asthma PMID: 20018959
Cancer PMID: 16311244
Chronic kidney failure PMID: 19578796
Chronic obstructive pulmonary disease (COPD) PMID: 16676616
Endometriosis PMID: 18308831
Glomerulonephritis PMID: 19420105
Inflammatory process of male genital tract PMID: 24528255
Leucocytospermia PMID: 24528255
Metabolic syndrome PMID: 19056482
Multiple sclerosis PMID: 19628284
Endometriosis INFBASE18308831
Rheumatoid arthritis PMID: 17373931

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
18308831 Endometrio
sis
MMP1 -1607 1G/2G, MMP2 -1575 G/A (MMP2.1), -1306 C/T (MMP2.2), MMP3 -1612 5A/6A, MMP7 -153 C/T (MMP7.1), -181 A/G (MMP7.2), MMP12 -82 A/G and MMP13-77 A/G
468 (227 endome
triosis, 241 co
ntrols)
MMP12
MMP13
Show abstract