Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 5715
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol PSMD9   Gene   UCSC   Ensembl
Aliases Rpn4, p27
Gene name proteasome 26S subunit, non-ATPase 9
Alternate names 26S proteasome non-ATPase regulatory subunit 9, 26S proteasome regulatory subunit p27, homolog of rat Bridge 1, proteasome (prosome, macropain) 26S subunit, non-ATPase, 9, proteasome 26S non-ATPase regulatory subunit 9,
Gene location 12q24.31 (121888730: 121917864)     Exons: 6     NC_000012.12
Gene summary(Entrez) The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a non-ATPase subunit of the 19S regulator. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, May 2012]
OMIM 603146

Protein Summary

Protein general information O00233  

Name: 26S proteasome non ATPase regulatory subunit 9 (26S proteasome regulatory subunit p27)

Length: 223  Mass: 24,682

Tissue specificity: Expressed in all tissues tested, highly expressed in liver and kidney.

Sequence MSDEEARQSGGSSQAGVVTVSDVQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRSDVDLYQVRTA
RHNIICLQNDHKAVMKQVEEALHQLHARDKEKQARDMAEAHKEAMSRKLGQSESQGPPRAFAKVNSISPGSPASI
AGLQVDDEIVEFGSVNTQNFQSLHNIGSVVQHSEGKPLNVTVIRRGEKHQLRLVPTRWAGKGLLGCNIIPLQR
Structural information
Protein Domains
PDZ. (108-195)
Interpro:  IPR001478

Pfam:  
PF13180
MINT:   1435362
STRING:   ENSP00000440485;
Other Databases GeneCards:  PSMD9;  Malacards:  PSMD9

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000165 MAPK cascade
TAS biological_process
GO:0000209 protein polyubiquitinatio
n
TAS biological_process
GO:0002223 stimulatory C-type lectin
receptor signaling pathw
ay
TAS biological_process
GO:0002479 antigen processing and pr
esentation of exogenous p
eptide antigen via MHC cl
ass I, TAP-dependent
TAS biological_process
GO:0003713 transcription coactivator
activity
ISS molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IBA cellular_component
GO:0005634 nucleus
ISS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005737 cytoplasm
IBA cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005838 proteasome regulatory par
ticle
NAS cellular_component
GO:0006511 ubiquitin-dependent prote
in catabolic process
NAS biological_process
GO:0006521 regulation of cellular am
ino acid metabolic proces
s
TAS biological_process
GO:0031145 anaphase-promoting comple
x-dependent catabolic pro
cess
TAS biological_process
GO:0031145 anaphase-promoting comple
x-dependent catabolic pro
cess
TAS biological_process
GO:0032024 positive regulation of in
sulin secretion
ISS biological_process
GO:0033209 tumor necrosis factor-med
iated signaling pathway
TAS biological_process
GO:0038061 NIK/NF-kappaB signaling
TAS biological_process
GO:0038095 Fc-epsilon receptor signa
ling pathway
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043425 bHLH transcription factor
binding
ISS molecular_function
GO:0043488 regulation of mRNA stabil
ity
TAS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0046676 negative regulation of in
sulin secretion
ISS biological_process
GO:0050852 T cell receptor signaling
pathway
TAS biological_process
GO:0051436 negative regulation of ub
iquitin-protein ligase ac
tivity involved in mitoti
c cell cycle
TAS biological_process
GO:0051437 positive regulation of ub
iquitin-protein ligase ac
tivity involved in regula
tion of mitotic cell cycl
e transition
TAS biological_process
GO:0060071 Wnt signaling pathway, pl
anar cell polarity pathwa
y
TAS biological_process
GO:0070682 proteasome regulatory par
ticle assembly
IMP biological_process
GO:0090090 negative regulation of ca
nonical Wnt signaling pat
hway
TAS biological_process
GO:0090263 positive regulation of ca
nonical Wnt signaling pat
hway
TAS biological_process
GO:0008540 proteasome regulatory par
ticle, base subcomplex
IDA cellular_component
GO:0000165 MAPK cascade
TAS biological_process
GO:0000209 protein polyubiquitinatio
n
TAS biological_process
GO:0002223 stimulatory C-type lectin
receptor signaling pathw
ay
TAS biological_process
GO:0002479 antigen processing and pr
esentation of exogenous p
eptide antigen via MHC cl
ass I, TAP-dependent
TAS biological_process
GO:0003713 transcription coactivator
activity
ISS molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IBA cellular_component
GO:0005634 nucleus
ISS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005737 cytoplasm
IBA cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005838 proteasome regulatory par
ticle
NAS cellular_component
GO:0006511 ubiquitin-dependent prote
in catabolic process
NAS biological_process
GO:0006521 regulation of cellular am
ino acid metabolic proces
s
TAS biological_process
GO:0031145 anaphase-promoting comple
x-dependent catabolic pro
cess
TAS biological_process
GO:0031145 anaphase-promoting comple
x-dependent catabolic pro
cess
TAS biological_process
GO:0032024 positive regulation of in
sulin secretion
ISS biological_process
GO:0033209 tumor necrosis factor-med
iated signaling pathway
TAS biological_process
GO:0038061 NIK/NF-kappaB signaling
TAS biological_process
GO:0038095 Fc-epsilon receptor signa
ling pathway
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043425 bHLH transcription factor
binding
ISS molecular_function
GO:0043488 regulation of mRNA stabil
ity
TAS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0046676 negative regulation of in
sulin secretion
ISS biological_process
GO:0050852 T cell receptor signaling
pathway
TAS biological_process
GO:0051436 negative regulation of ub
iquitin-protein ligase ac
tivity involved in mitoti
c cell cycle
TAS biological_process
GO:0051437 positive regulation of ub
iquitin-protein ligase ac
tivity involved in regula
tion of mitotic cell cycl
e transition
TAS biological_process
GO:0060071 Wnt signaling pathway, pl
anar cell polarity pathwa
y
TAS biological_process
GO:0070682 proteasome regulatory par
ticle assembly
IMP biological_process
GO:0090090 negative regulation of ca
nonical Wnt signaling pat
hway
TAS biological_process
GO:0090263 positive regulation of ca
nonical Wnt signaling pat
hway
TAS biological_process
GO:0008540 proteasome regulatory par
ticle, base subcomplex
IDA cellular_component
GO:0000165 MAPK cascade
TAS biological_process
GO:0000209 protein polyubiquitinatio
n
TAS biological_process
GO:0002223 stimulatory C-type lectin
receptor signaling pathw
ay
TAS biological_process
GO:0002479 antigen processing and pr
esentation of exogenous p
eptide antigen via MHC cl
ass I, TAP-dependent
TAS biological_process
GO:0003713 transcription coactivator
activity
ISS molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IBA cellular_component
GO:0005634 nucleus
ISS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005654 nucleoplasm
TAS cellular_component
GO:0005737 cytoplasm
IBA cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005829 cytosol
TAS cellular_component
GO:0005838 proteasome regulatory par
ticle
NAS cellular_component
GO:0006511 ubiquitin-dependent prote
in catabolic process
NAS biological_process
GO:0006521 regulation of cellular am
ino acid metabolic proces
s
TAS biological_process
GO:0031145 anaphase-promoting comple
x-dependent catabolic pro
cess
TAS biological_process
GO:0031145 anaphase-promoting comple
x-dependent catabolic pro
cess
TAS biological_process
GO:0032024 positive regulation of in
sulin secretion
ISS biological_process
GO:0033209 tumor necrosis factor-med
iated signaling pathway
TAS biological_process
GO:0038061 NIK/NF-kappaB signaling
TAS biological_process
GO:0038095 Fc-epsilon receptor signa
ling pathway
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043161 proteasome-mediated ubiqu
itin-dependent protein ca
tabolic process
TAS biological_process
GO:0043425 bHLH transcription factor
binding
ISS molecular_function
GO:0043488 regulation of mRNA stabil
ity
TAS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0046676 negative regulation of in
sulin secretion
ISS biological_process
GO:0050852 T cell receptor signaling
pathway
TAS biological_process
GO:0051436 negative regulation of ub
iquitin-protein ligase ac
tivity involved in mitoti
c cell cycle
TAS biological_process
GO:0051437 positive regulation of ub
iquitin-protein ligase ac
tivity involved in regula
tion of mitotic cell cycl
e transition
TAS biological_process
GO:0060071 Wnt signaling pathway, pl
anar cell polarity pathwa
y
TAS biological_process
GO:0070682 proteasome regulatory par
ticle assembly
IMP biological_process
GO:0090090 negative regulation of ca
nonical Wnt signaling pat
hway
TAS biological_process
GO:0090263 positive regulation of ca
nonical Wnt signaling pat
hway
TAS biological_process
GO:0008540 proteasome regulatory par
ticle, base subcomplex
IDA cellular_component

Diseases

Associated diseases References
Depression PMID: 18504423
Diabetes PMID: 17516568
Endometriosis PMID: 19493606
Endometriosis INFBASE19493606
Polycystic ovary syndrome (PCOS) PMID: 19631369
Premature ovarian failure ( POF) PMID: 23665265

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
19493606 Endometrio
sis
p27 (V109G ) Brazili
an
213 (104 patien
ts, 109 control
subjects)
p27
Show abstract