Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 7026
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol NR2F2   Gene   UCSC   Ensembl
Aliases ARP1, CHTD4, COUPTFB, COUPTFII, NF-E3, NR2F1, SVP40, TFCOUP2
Gene name nuclear receptor subfamily 2 group F member 2
Alternate names COUP transcription factor 2, ADP-ribosylation factor related protein 1, COUP transcription factor II, apolipoprotein A-I regulatory protein 1, apolipoprotein AI regulatory protein 1, chicken ovalbumin upstream promoter transcription factor 2, chicken ovalbumin ,
Gene location 15q26.2 (96325927: 96340262)     Exons: 6     NC_000015.10
Gene summary(Entrez) This gene encodes a member of the steroid thyroid hormone superfamily of nuclear receptors. The encoded protein is a ligand inducible transcription factor that is involved in the regulation of many different genes. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Mar 2010]
OMIM 107773

Protein Summary

Protein general information P24468  

Name: COUP transcription factor 2 (COUP TF2) (Apolipoprotein A I regulatory protein 1) (ARP 1) (COUP transcription factor II) (COUP TF II) (Nuclear receptor subfamily 2 group F member 2)

Length: 414  Mass: 45,571

Tissue specificity: Ubiquitous.

Sequence MAMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGGPGGPGSDKQQQQQ
HIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQ
RGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVE
WARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVE
KLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSS
SVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMAIQ
Structural information
Interpro:  IPR003068 IPR000536 IPR001723 IPR001628 IPR013088
Prosite:   PS00031 PS51030

Pfam:  
PF00104 PF00105

PDB:  
3CJW
PDBsum:   3CJW

DIP:  
29713
MINT:   1183332
STRING:   ENSP00000377721;
Other Databases GeneCards:  MIR1469;NR2F2;  Malacards:  MIR1469

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
IDA biological_process
GO:0001764 neuron migration
IEA biological_process
GO:0001893 maternal placenta develop
ment
IEA biological_process
GO:0001937 negative regulation of en
dothelial cell proliferat
ion
IMP biological_process
GO:0001972 retinoic acid binding
IDA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IDA molecular_function
GO:0003707 steroid hormone receptor
activity
IEA molecular_function
GO:0003714 transcription corepressor
activity
TAS molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IDA cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
TAS biological_process
GO:0006629 lipid metabolic process
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007519 skeletal muscle tissue de
velopment
IEA biological_process
GO:0008270 zinc ion binding
IEA molecular_function
GO:0009566 fertilization
IEA biological_process
GO:0009952 anterior/posterior patter
n specification
IEA biological_process
GO:0009956 radial pattern formation
IEA biological_process
GO:0010596 negative regulation of en
dothelial cell migration
IMP biological_process
GO:0030522 intracellular receptor si
gnaling pathway
IEA biological_process
GO:0030900 forebrain development
IEA biological_process
GO:0032355 response to estradiol
IEA biological_process
GO:0042803 protein homodimerization
activity
IPI molecular_function
GO:0043401 steroid hormone mediated
signaling pathway
IEA biological_process
GO:0043565 sequence-specific DNA bin
ding
IDA molecular_function
GO:0045736 negative regulation of cy
clin-dependent protein se
rine/threonine kinase act
ivity
IDA biological_process
GO:0045892 negative regulation of tr
anscription, DNA-template
d
IDA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IDA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IMP biological_process
GO:0048514 blood vessel morphogenesi
s
IEA biological_process
GO:0060173 limb development
IEA biological_process
GO:0060674 placenta blood vessel dev
elopment
IEA biological_process
GO:0060707 trophoblast giant cell di
fferentiation
IEA biological_process
GO:0060849 regulation of transcripti
on involved in lymphatic
endothelial cell fate com
mitment
IMP biological_process
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
IEA biological_process
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
IDA biological_process
GO:0001701 in utero embryonic develo
pment
IEA biological_process
GO:0001764 neuron migration
IEA biological_process
GO:0001893 maternal placenta develop
ment
IEA biological_process
GO:0001937 negative regulation of en
dothelial cell proliferat
ion
IMP biological_process
GO:0001945 lymph vessel development
IEA biological_process
GO:0001972 retinoic acid binding
IDA molecular_function
GO:0003677 DNA binding
IEA molecular_function
GO:0003677 DNA binding
IEA molecular_function
GO:0003677 DNA binding
IEA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IEA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IDA molecular_function
GO:0003707 steroid hormone receptor
activity
IEA molecular_function
GO:0003714 transcription corepressor
activity
TAS molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IEA molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IDA molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
TAS molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
IEA biological_process
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
TAS biological_process
GO:0006629 lipid metabolic process
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007519 skeletal muscle tissue de
velopment
IEA biological_process
GO:0008270 zinc ion binding
IEA molecular_function
GO:0009566 fertilization
IEA biological_process
GO:0009952 anterior/posterior patter
n specification
IEA biological_process
GO:0009956 radial pattern formation
IEA biological_process
GO:0010596 negative regulation of en
dothelial cell migration
IMP biological_process
GO:0030522 intracellular receptor si
gnaling pathway
IEA biological_process
GO:0030900 forebrain development
IEA biological_process
GO:0032355 response to estradiol
IEA biological_process
GO:0042803 protein homodimerization
activity
IPI molecular_function
GO:0043401 steroid hormone mediated
signaling pathway
IEA biological_process
GO:0043565 sequence-specific DNA bin
ding
IEA molecular_function
GO:0043565 sequence-specific DNA bin
ding
IEA molecular_function
GO:0043565 sequence-specific DNA bin
ding
IDA molecular_function
GO:0045736 negative regulation of cy
clin-dependent protein se
rine/threonine kinase act
ivity
IDA biological_process
GO:0045892 negative regulation of tr
anscription, DNA-template
d
IDA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IDA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IMP biological_process
GO:0046872 metal ion binding
IEA molecular_function
GO:0048514 blood vessel morphogenesi
s
IEA biological_process
GO:0060173 limb development
IEA biological_process
GO:0060674 placenta blood vessel dev
elopment
IEA biological_process
GO:0060707 trophoblast giant cell di
fferentiation
IEA biological_process
GO:0060849 regulation of transcripti
on involved in lymphatic
endothelial cell fate com
mitment
IMP biological_process
GO:0000122 negative regulation of tr
anscription from RNA poly
merase II promoter
IDA biological_process
GO:0001937 negative regulation of en
dothelial cell proliferat
ion
IMP biological_process
GO:0001972 retinoic acid binding
IDA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IDA molecular_function
GO:0003714 transcription corepressor
activity
TAS molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IDA molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
TAS molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IDA cellular_component
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
TAS biological_process
GO:0006629 lipid metabolic process
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0010596 negative regulation of en
dothelial cell migration
IMP biological_process
GO:0042803 protein homodimerization
activity
IPI molecular_function
GO:0043565 sequence-specific DNA bin
ding
IDA molecular_function
GO:0045736 negative regulation of cy
clin-dependent protein se
rine/threonine kinase act
ivity
IDA biological_process
GO:0045892 negative regulation of tr
anscription, DNA-template
d
IDA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IDA biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
IMP biological_process
GO:0060849 regulation of transcripti
on involved in lymphatic
endothelial cell fate com
mitment
IMP biological_process

Diseases

Associated diseases References
Ovarian endometriosis INFBASE16815388
Endometriosis INFBASE15299092
Ovarian endometriosis PMID: 16815388
Unexplained azoospermia PMID: 26662397

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
15299092 Endometrio
sis


Female infertility PDGFRA
PKC beta1
JAK1
Sprouty2
MKK7
COUP-TF2
PGE2EP
Show abstract
16815388 Endometrio
sis (ovari
an)


Female infertility PDGFRA
PKCbeta1
JAK1
HSP90A
COUP-TF2
MOR
17betaHSD2
Sprouty2 and PGE(2)EP3
Show abstract
24423359 Endometrio
sis

57 (21 endometr
ial and 36 endo
metriotic tissu
e)
COX-2
COUP-TFII
Show abstract
19001523 Endometrio
sis


StAR
side chain cleavage P450
3beta-hydroxysteroid-dehydrogenase-2
17-hydroxylase/17-20-lyase
aromatase
SF1
COUP-TFII
WT1
Show abstract