Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 8743
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol TNFSF10   Gene   UCSC   Ensembl
Aliases APO2L, Apo-2L, CD253, TL2, TNLG6A, TRAIL
Gene name TNF superfamily member 10
Alternate names tumor necrosis factor ligand superfamily member 10, Apo-2 ligand, TNF-related apoptosis inducing ligand TRAIL, chemokine tumor necrosis factor ligand superfamily member 10, tumor necrosis factor (ligand) family, member 10, tumor necrosis factor (ligand) superf,
Gene location 3q26.31 (172523506: 172505507)     Exons: 6     NC_000003.12
Gene summary(Entrez) The protein encoded by this gene is a cytokine that belongs to the tumor necrosis factor (TNF) ligand family. This protein preferentially induces apoptosis in transformed and tumor cells, but does not appear to kill normal cells although it is expressed at a significant level in most normal tissues. This protein binds to several members of TNF receptor superfamily including TNFRSF10A/TRAILR1, TNFRSF10B/TRAILR2, TNFRSF10C/TRAILR3, TNFRSF10D/TRAILR4, and possibly also to TNFRSF11B/OPG. The activity of this protein may be modulated by binding to the decoy receptors TNFRSF10C/TRAILR3, TNFRSF10D/TRAILR4, and TNFRSF11B/OPG that cannot induce apoptosis. The binding of this protein to its receptors has been shown to trigger the activation of MAPK8/JNK, caspase 8, and caspase 3. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2010]
OMIM 603598

Protein Summary

Protein general information P50591  

Name: Tumor necrosis factor ligand superfamily member 10 (Apo 2 ligand) (Apo 2L) (TNF related apoptosis inducing ligand) (Protein TRAIL) (CD antigen CD253)

Length: 281  Mass: 32,509

Tissue specificity: Widespread; most predominant in spleen, lung and prostate.

Sequence MAMMEVQGGPSLGQTCVLIVIFTVLLQSLCVAVTYVYFTNELKQMQDKYSKSGIACFLKEDDSYWDPNDEESMNS
PCWQVKWQLRQLVRKMILRTSEETISTVQEKQQNISPLVRERGPQRVAAHITGTRGRSNTLSSPNSKNEKALGRK
INSWESSRSGHSFLSNLHLRNGELVIHEKGFYYIYSQTYFRFQEEIKENTKNDKQMVQYIYKYTSYPDPILLMKS
ARNSCWSKDAEYGLYSIYQGGIFELKENDRIFVSVTNEHLIDMDHEASFFGAFLVG
Structural information
Interpro:  IPR021184 IPR006052 IPR017355 IPR008983
Prosite:   PS00251 PS50049

Pfam:  
PF00229

PDB:  
1D0G 1D2Q 1D4V 1DG6 1DU3 4N90 5CIR
PDBsum:   1D0G 1D2Q 1D4V 1DG6 1DU3 4N90 5CIR

DIP:  
6230
MINT:   109168
STRING:   ENSP00000241261;
Other Databases GeneCards:  TNFSF10;  Malacards:  TNFSF10

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0005102 receptor binding
TAS molecular_function
GO:0005102 receptor binding
TAS molecular_function
GO:0005125 cytokine activity
IEA molecular_function
GO:0005164 tumor necrosis factor rec
eptor binding
IEA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005615 extracellular space
IEA cellular_component
GO:0005887 integral component of pla
sma membrane
TAS cellular_component
GO:0006915 apoptotic process
TAS biological_process
GO:0006919 activation of cysteine-ty
pe endopeptidase activity
involved in apoptotic pr
ocess
TAS biological_process
GO:0006955 immune response
IEA biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007166 cell surface receptor sig
naling pathway
TAS biological_process
GO:0007267 cell-cell signaling
TAS biological_process
GO:0043065 positive regulation of ap
optotic process
IDA biological_process
GO:0043123 positive regulation of I-
kappaB kinase/NF-kappaB s
ignaling
IEP biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0046872 metal ion binding
IEA molecular_function
GO:0070062 extracellular exosome
IDA cellular_component
GO:0090200 positive regulation of re
lease of cytochrome c fro
m mitochondria
IDA biological_process
GO:0097296 activation of cysteine-ty
pe endopeptidase activity
involved in apoptotic si
gnaling pathway
TAS biological_process
GO:1902041 regulation of extrinsic a
poptotic signaling pathwa
y via death domain recept
ors
TAS biological_process
GO:1902042 negative regulation of ex
trinsic apoptotic signali
ng pathway via death doma
in receptors
TAS biological_process
GO:1902042 negative regulation of ex
trinsic apoptotic signali
ng pathway via death doma
in receptors
TAS biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:0005102 receptor binding
TAS molecular_function
GO:0005102 receptor binding
TAS molecular_function
GO:0005125 cytokine activity
IEA molecular_function
GO:0005164 tumor necrosis factor rec
eptor binding
IEA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005615 extracellular space
IEA cellular_component
GO:0005887 integral component of pla
sma membrane
TAS cellular_component
GO:0006915 apoptotic process
IEA biological_process
GO:0006915 apoptotic process
TAS biological_process
GO:0006919 activation of cysteine-ty
pe endopeptidase activity
involved in apoptotic pr
ocess
TAS biological_process
GO:0006955 immune response
IEA biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007166 cell surface receptor sig
naling pathway
TAS biological_process
GO:0007267 cell-cell signaling
TAS biological_process
GO:0016020 membrane
IEA cellular_component
GO:0016020 membrane
IEA cellular_component
GO:0016020 membrane
IEA cellular_component
GO:0016021 integral component of mem
brane
IEA cellular_component
GO:0032813 tumor necrosis factor rec
eptor superfamily binding
IEA molecular_function
GO:0043065 positive regulation of ap
optotic process
IDA biological_process
GO:0043123 positive regulation of I-
kappaB kinase/NF-kappaB s
ignaling
IEP biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0046872 metal ion binding
IEA molecular_function
GO:0070062 extracellular exosome
IDA cellular_component
GO:0090200 positive regulation of re
lease of cytochrome c fro
m mitochondria
IDA biological_process
GO:0097296 activation of cysteine-ty
pe endopeptidase activity
involved in apoptotic si
gnaling pathway
TAS biological_process
GO:1902041 regulation of extrinsic a
poptotic signaling pathwa
y via death domain recept
ors
TAS biological_process
GO:1902042 negative regulation of ex
trinsic apoptotic signali
ng pathway via death doma
in receptors
TAS biological_process
GO:1902042 negative regulation of ex
trinsic apoptotic signali
ng pathway via death doma
in receptors
TAS biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IEA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:0005102 receptor binding
TAS molecular_function
GO:0005102 receptor binding
TAS molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005576 extracellular region
TAS cellular_component
GO:0005887 integral component of pla
sma membrane
TAS cellular_component
GO:0006915 apoptotic process
TAS biological_process
GO:0006919 activation of cysteine-ty
pe endopeptidase activity
involved in apoptotic pr
ocess
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007165 signal transduction
TAS biological_process
GO:0007166 cell surface receptor sig
naling pathway
TAS biological_process
GO:0007267 cell-cell signaling
TAS biological_process
GO:0043065 positive regulation of ap
optotic process
IDA biological_process
GO:0043123 positive regulation of I-
kappaB kinase/NF-kappaB s
ignaling
IEP biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0043280 positive regulation of cy
steine-type endopeptidase
activity involved in apo
ptotic process
IDA biological_process
GO:0070062 extracellular exosome
IDA cellular_component
GO:0090200 positive regulation of re
lease of cytochrome c fro
m mitochondria
IDA biological_process
GO:0097296 activation of cysteine-ty
pe endopeptidase activity
involved in apoptotic si
gnaling pathway
TAS biological_process
GO:1902041 regulation of extrinsic a
poptotic signaling pathwa
y via death domain recept
ors
TAS biological_process
GO:1902042 negative regulation of ex
trinsic apoptotic signali
ng pathway via death doma
in receptors
TAS biological_process
GO:1902042 negative regulation of ex
trinsic apoptotic signali
ng pathway via death doma
in receptors
TAS biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process
GO:2001238 positive regulation of ex
trinsic apoptotic signali
ng pathway
IDA biological_process

KEGG pathways

hsa04060  Cytokine-cytokine receptor interaction
hsa05164  Influenza A
hsa04068  FoxO signaling pathway
hsa04210  Apoptosis
hsa05162  Measles
hsa04650  Natural killer cell mediated cytotoxicity
hsa04217  Necroptosis

Diseases

Associated diseases References
Endometriosis PMID: 22392486
Endometriosis INFBASE22392486
Male Infertility PMID: 21317160
Male infertility PMID: 24825910
Multiple sclerosis PMID: 16040132
Systemic lupus erythematosus PMID: 18174230

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
15242994 Endometrio
sis

64
OPG
TRAIL
Show abstract
22392486 Endometrio
sis
TRAIL (c.49G>A, c.592A>G, c.615A>G, and c.662T>C; DR4 c.626G>C and c.1322A>G; DR5 c.95C>T, c.200C>T, and c.72T>G), OPG -(245T>G, c.9C>G, c.788A>C, and c.9938G>T) Korean
352 (138 women
with endometrio
sis, 214 women
without endomet
riosis)
TRAIL
OPG
Show abstract