Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 9435
Gene Summary        Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol CHST2   Gene   UCSC   Ensembl
Aliases C6ST, GST-2, GST2, Gn6ST-1, HEL-S-75, glcNAc6ST-1
Gene name carbohydrate sulfotransferase 2
Alternate names carbohydrate sulfotransferase 2, N-acetylglucosamine 6-O-sulfotransferase 1, carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2, carbohydrate (chondroitin 6/keratan) sulfotransferase 2, epididymis secretory protein Li 75, galactose/N-acetylglucosamine/N,
Gene location 3q24 (143119775: 143124013)     Exons: 2     NC_000003.12
Gene summary(Entrez) This locus encodes a sulfotransferase protein. The encoded enzyme catalyzes the sulfation of a nonreducing N-acetylglucosamine residue, and may play a role in biosynthesis of 6-sulfosialyl Lewis X antigen. [provided by RefSeq, Aug 2011]
OMIM 603798

Protein Summary

Protein general information Q9Y4C5  

Name: Carbohydrate sulfotransferase 2 (EC 2.8.2. ) (Galactose/N acetylglucosamine/N acetylglucosamine 6 O sulfotransferase 2) (GST 2) (N acetylglucosamine 6 O sulfotransferase 1) (GlcNAc6ST 1) (Gn6ST 1)

Length: 530  Mass: 57,857

Tissue specificity: Widely expressed. Highly expressed in bone marrow, peripheral blood leukocytes, spleen, brain, spinal cord, ovary and placenta. Expressed by high endothelial cells (HEVs) and leukocytes. {ECO

Sequence MSRSPQRALPPGALPRLLQAAPAAAPRALLPQWPRRPGRRWPASPLGMKVFRRKALVLCAGYALLLVLTMLNLLD
YKWHKEPLQQCNPDGPLGAAAGAAGGSWGRPGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAGMAGVAAPP
GNGTRGTGGVGDKRQLVYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSALYR
CDLSVFQLYSPAGSGGRNLTTLGIFGAATNKVVCSSPLCPAYRKEVVGLVDDRVCKKCPPQRLARFEEECRKYRT
LVIKGVRVFDVAVLAPLLRDPALDLKVIHLVRDPRAVASSRIRSRHGLIRESLQVVRSRDPRAHRMPFLEAAGHK
LGAKKEGVGGPADYHALGAMEVICNSMAKTLQTALQPPDWLQGHYLVVRYEDLVGDPVKTLRRVYDFVGLLVSPE
MEQFALNMTSGSGSSSKPFVVSARNATQAANAWRTALTFQQIKQVEEFCYQPMAVLGYERVNSPEEVKDLSKTLL
RKPRL
Structural information
Interpro:  IPR016469 IPR027417 IPR000863

Pfam:  
PF00685
STRING:   ENSP00000307911;
Other Databases GeneCards:  CHST2;  Malacards:  CHST2

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0000139 Golgi membrane
TAS cellular_component
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
IDA molecular_function
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
IDA molecular_function
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
TAS molecular_function
GO:0005802 trans-Golgi network
IDA cellular_component
GO:0005975 carbohydrate metabolic pr
ocess
IEA biological_process
GO:0006044 N-acetylglucosamine metab
olic process
IDA biological_process
GO:0006790 sulfur compound metabolic
process
IDA biological_process
GO:0006954 inflammatory response
IEA biological_process
GO:0007275 multicellular organism de
velopment
TAS biological_process
GO:0008146 sulfotransferase activity
TAS molecular_function
GO:0016021 integral component of mem
brane
IBA cellular_component
GO:0018146 keratan sulfate biosynthe
tic process
TAS biological_process
GO:0031228 intrinsic component of Go
lgi membrane
NAS cellular_component
GO:0000139 Golgi membrane
IEA cellular_component
GO:0000139 Golgi membrane
TAS cellular_component
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
IDA molecular_function
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
IDA molecular_function
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
TAS molecular_function
GO:0005794 Golgi apparatus
IEA cellular_component
GO:0005794 Golgi apparatus
IEA cellular_component
GO:0005802 trans-Golgi network
IDA cellular_component
GO:0005975 carbohydrate metabolic pr
ocess
IEA biological_process
GO:0005975 carbohydrate metabolic pr
ocess
IEA biological_process
GO:0006044 N-acetylglucosamine metab
olic process
IDA biological_process
GO:0006790 sulfur compound metabolic
process
IDA biological_process
GO:0006954 inflammatory response
IEA biological_process
GO:0006954 inflammatory response
TAS biological_process
GO:0007275 multicellular organism de
velopment
TAS biological_process
GO:0008146 sulfotransferase activity
IEA molecular_function
GO:0008146 sulfotransferase activity
IEA molecular_function
GO:0008146 sulfotransferase activity
TAS molecular_function
GO:0016020 membrane
IEA cellular_component
GO:0016021 integral component of mem
brane
IBA cellular_component
GO:0016021 integral component of mem
brane
IEA cellular_component
GO:0016740 transferase activity
IEA molecular_function
GO:0018146 keratan sulfate biosynthe
tic process
TAS biological_process
GO:0031228 intrinsic component of Go
lgi membrane
NAS cellular_component
GO:0000139 Golgi membrane
TAS cellular_component
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
IDA molecular_function
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
IDA molecular_function
GO:0001517 N-acetylglucosamine 6-O-s
ulfotransferase activity
TAS molecular_function
GO:0005802 trans-Golgi network
IDA cellular_component
GO:0006044 N-acetylglucosamine metab
olic process
IDA biological_process
GO:0006790 sulfur compound metabolic
process
IDA biological_process
GO:0006954 inflammatory response
TAS biological_process
GO:0007275 multicellular organism de
velopment
TAS biological_process
GO:0008146 sulfotransferase activity
TAS molecular_function
GO:0016021 integral component of mem
brane
IBA cellular_component
GO:0018146 keratan sulfate biosynthe
tic process
TAS biological_process
GO:0031228 intrinsic component of Go
lgi membrane
NAS cellular_component

KEGG pathways

hsa00533  Glycosaminoglycan biosynthesis - keratan sulfate

Diseases

Associated diseases References
Endometriosis PMID: 12810542
Hearing loss PMID: 19898482
Female infertility INFBASE12810542
Implantation defects INFBASE12810542
Endometriosis INFBASE12810542

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
12810542 Endometrio
sis


IL-15
proline-rich protein
B61
Dickkopf-1
glycodelin
N-acetylglucosamine-6-O-sulfotransferase
G0S2 protein
purine nucleoside phosphorylase
semaphorin E
neuronal olfactomedin-related endoplasmic reticulum localized protein mRNA
Sam68-like phospho
Show abstract